An almost idiot's guide to install PostgreSQL 9.3, PostGIS 2.1 and pgRouting with Yum

In this exercise, we'll go thru installing PostgreSQL 9.3 on a CentOS 6 64-bit box. We'll cover upgrading in a later article. For the rest of this article, we'll go over configuring yum to use the PostgreSQL PGDG Yum repository found at http://yum.postgresql.org , which has the latest and greatest of 9.3. It's been a while since we wrote step by step instructions for installing with Yum.

Note: PostGIS 2.1.2 release is eminent, so you might want to wait till we release and Yum is updated before you install/upgrade.

Last we did was An almost idiot's guide to Install PostgreSQL 9.0 with Yum which is now very dated.

Installing PostgreSQL 9.3 from Yum repository

The list of latest PostgreSQL versions and repos for Fedora 18-20, Red Hat 5-6, CentOS 5-6, and Scientific Linux 5-6 are located at http://yum.postgresql.org/repopackages.php.

  1. Figure out which OS you are on. Note the PGDG repository 9.3 only has binaries for the aforementioned, though for lower versions you can still get 9.2, 9.1 etc..

    First run

    uname -a
    Mine happens to return: Linux 30266-3-2358424 2.6.32-358.2.1.el6.x86_64 #1 SMP Wed Mar 13 00:26:49 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux so I know its a 64-bit because of the X86_64 at the end.
    cat /etc/redhat-release
    Mine returns:
    CentOS release 6.4 (Final)
  2. Install the right rpms from http://yum.postgresql.org/repopackages.php for your platform (note the hyperlink url) since you'll need it for rpm addition. In our case:
    sudo rpm -ivh http://yum.postgresql.org/9.3/redhat/rhel-6-x86_64/pgdg-centos93-9.3-1.noarch.rpm
  3. sudo yum list | grep postgresql should give you entries that look something like below and the ones we want are marked with pgdg93.
    bacula-director-postgresql.x86_64        5.0.0-12.el6                   base
    bacula-storage-postgresql.x86_64         5.0.0-12.el6                   base
    freeradius-postgresql.x86_64             2.1.12-4.el6_3                 base
    postgresql.i686                          8.4.20-1.el6_5                 updates
    postgresql.x86_64                        8.4.20-1.el6_5                 updates
    postgresql-contrib.x86_64                8.4.20-1.el6_5                 updates
    postgresql-devel.i686                    8.4.20-1.el6_5                 updates
    postgresql-devel.x86_64                  8.4.20-1.el6_5                 updates
    postgresql-docs.x86_64                   8.4.20-1.el6_5                 updates
    postgresql-jdbc.noarch                   8.4.701-8.el6                  base
    postgresql-libs.i686                     8.4.20-1.el6_5                 updates
    postgresql-libs.x86_64                   8.4.20-1.el6_5                 updates
    postgresql-odbc.x86_64                   08.04.0200-1.el6               base
    postgresql-plperl.x86_64                 8.4.20-1.el6_5                 updates
    postgresql-plpython.x86_64               8.4.20-1.el6_5                 updates
    postgresql-pltcl.x86_64                  8.4.20-1.el6_5                 updates
    postgresql-server.x86_64                 8.4.20-1.el6_5                 updates
    postgresql-test.x86_64                   8.4.20-1.el6_5                 updates
    postgresql93.x86_64                      9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-contrib.x86_64              9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-debuginfo.x86_64            9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-devel.x86_64                9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-docs.x86_64                 9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-jdbc.x86_64                 9.3.1100-1PGDG.rhel6           pgdg93
    postgresql93-jdbc-debuginfo.x86_64       9.3.1100-1PGDG.rhel6           pgdg93
    postgresql93-libs.x86_64                 9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-odbc.x86_64                 09.02.0100-1PGDG.rhel6         pgdg93
    postgresql93-odbc-debuginfo.x86_64       09.02.0100-1PGDG.rhel6         pgdg93
    postgresql93-plperl.x86_64               9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-plpython.x86_64             9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-pltcl.x86_64                9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-server.x86_64               9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-test.x86_64                 9.3.4-1PGDG.rhel6              pgdg93
    postgresql_autodoc.noarch                1.41-1.rhel6                   pgdg93
    qt-postgresql.i686                       1:4.6.2-28.el6_5               updates
    qt-postgresql.x86_64                     1:4.6.2-28.el6_5               updates
  4. To see all packages from pgdg93 do: yum list | grep pgdg93. This lists the core PostgreSQL offering and packaged PostgreSQL extensions. I've snipped the list a bit to show just extensions we often install:
    pgrouting_93.x86_64                      2.0.0-1.rhel6                  pgdg93
    pgrouting_93-debuginfo.x86_64            2.0.0-1.rhel6                  pgdg93
    pgxnclient.x86_64                        1.2.1-1.rhel6                  pgdg93
    :
    :
    plv8_93.x86_64                           1.4.1-1.rhel6                  pgdg93
    plv8_93-debuginfo.x86_64                 1.4.1-1.rhel6                  pgdg93
    postgis2_93.x86_64                       2.1.1-1.rhel6                  pgdg93
    postgis2_93-client.x86_64                2.1.1-1.rhel6                  pgdg93
    postgis2_93-debuginfo.x86_64             2.1.1-1.rhel6                  pgdg93
    postgis2_93-devel.x86_64                 2.1.1-1.rhel6                  pgdg93
    postgis2_93-docs.x86_64                  2.1.1-1.rhel6                  pgdg93
    postgis2_93-utils.x86_64                 2.1.1-1.rhel6                  pgdg93
    postgresql93.x86_64                      9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-contrib.x86_64              9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-debuginfo.x86_64            9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-devel.x86_64                9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-docs.x86_64                 9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-jdbc.x86_64                 9.3.1100-1PGDG.rhel6           pgdg93
    postgresql93-jdbc-debuginfo.x86_64       9.3.1100-1PGDG.rhel6           pgdg93
    postgresql93-libs.x86_64                 9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-odbc.x86_64                 09.02.0100-1PGDG.rhel6         pgdg93
    postgresql93-odbc-debuginfo.x86_64       09.02.0100-1PGDG.rhel6         pgdg93
    postgresql93-plperl.x86_64               9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-plpython.x86_64             9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-pltcl.x86_64                9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-server.x86_64               9.3.4-1PGDG.rhel6              pgdg93
    postgresql93-test.x86_64                 9.3.4-1PGDG.rhel6              pgdg93
    
  5. We usually install the below. The devel is optional but needed if you want to compile some other add on later like non-packaged extensions.

    yum install postgresql93 postgresql93-server postgresql93-libs postgresql93-contrib postgresql93-devel
  6. You should get a prompt something like:
    Dependencies Resolved
    
    ============================================================================================================================================================================================================================================================================================
     Package                                                                      Arch                                                           Version                                                                   Repository                                                      Size
    ============================================================================================================================================================================================================================================================================================
    Installing:
     postgresql93                                                                 x86_64                                                         9.3.4-1PGDG.rhel6                                                         pgdg93                                                         1.0 M
     postgresql93-contrib                                                         x86_64                                                         9.3.4-1PGDG.rhel6                                                         pgdg93                                                         483 k
     postgresql93-devel                                                           x86_64                                                         9.3.4-1PGDG.rhel6                                                         pgdg93                                                         1.5 M
     postgresql93-libs                                                            x86_64                                                         9.3.4-1PGDG.rhel6                                                         pgdg93                                                         190 k
     postgresql93-server                                                          x86_64                                                         9.3.4-1PGDG.rhel6                                                         pgdg93                                                         4.1 M
    Installing for dependencies:
     libxslt                                                                      x86_64                                                         1.1.26-2.el6_3.1                                                          base                                                           452 k
     uuid                                                                         x86_64                                                         1.6.1-10.el6                                                              base                                                            54 k
    
    Transaction Summary
    ============================================================================================================================================================================================================================================================================================
    Install       7 Package(s)
    
    Total download size: 7.7 M
    Installed size: 32 M
    Is this ok [y/N]:
    Type: y

    It should then download the packages and install them with a Complete! exclamation when done.

Installing PostGIS binaries

PostGIS unfortunately has a lot of dependencies because of GDAL and JSON dependency introduced in 2.0 and while most of the time it's as easy as adding:

sudo yum install postgis2_93

It often is not. As with this virgin box we tried installing on we got these errors:

Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libcfitsio.so.0()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libspatialite.so.2()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libnetcdf.so.6()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libfreexl.so.1()(64bit)
Error: Package: postgis2_93-client-2.1.1-1.rhel6.x86_64 (pgdg93)
           Requires: libjson.so.0()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libarmadillo.so.3()(64bit)
Error: Package: postgis2_93-2.1.1-1.rhel6.x86_64 (pgdg93)
           Requires: hdf5
Error: Package: postgis2_93-2.1.1-1.rhel6.x86_64 (pgdg93)
           Requires: json-c
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libhdf5.so.6()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libdap.so.11()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libCharLS.so.1()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libdapserver.so.7()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libdapclient.so.3()(64bit)
Error: Package: postgis2_93-2.1.1-1.rhel6.x86_64 (pgdg93)
           Requires: libjson.so.0()(64bit)
Error: Package: gdal-libs-1.9.2-4.el6.x86_64 (pgdg93)
           Requires: libgta.so.0()(64bit)

The issue is the dependency packages are not distributed with yum postgresql repo. Most of these are in the RHEL Extra Packages for Enterprise Linux (EPEL) repo. So if you get these errors, do the following:

Note that after all this, you still need to enable PostGIS in each database you will want to use it in. We'll cover that later in this article after we are done setting up the PostgreSQL service.

Installing pgRouting binaries

pgRouting is also now available via Yum. Devrim was kind enough to add CGAL to the repo to simplify the install a bit. So If you want to use pgRouting with PostGIS, it should be a simple:

yum install pgrouting_93

If you need to configure things the way you want to configure things

Skip this section if you just want to run with defaults and will only have one instance of PostgreSQL

If you plan to run multiple versions of PostgreSQL e.g. stable 9.3 and devl 9.4, on the same server (so they use different ports), or you just need to be in control of all your options, you'll want to tweak your services scripts a bit. The best way to do that is to edit/create a file in /etc/sysconfig/pgsql/postgresql-9.3 with your preferred changes:

Note that # are remarks to you so don't type them in

su root
vi /etc/sysconfig/pgsql/postgresql-9.3

if the file doesn't exist -- it will be blank which is okay: Click i to insert a line and start typing. I generally like to run on non-standard ports just to avoid postgresql bots blindly pinging on 5432. You also need to run on different ports if you have multiple instances running on same server. Note: PGDATA you don't need to add unless you are unhappy with the default location.

My file when I am done will look something like this

PGPORT=5438
PGDATA=/pgdata93

Click Escape key followed by :w :q (:w saves the file and :q exits)

Creating PostgreSQL data cluster and starting the service

With the Yum setup each version of postgresql goes in its own separate folder, so you can easily have parallel installs of different versions of PostgreSQL without worring about overriding the default data folder. Devrim has the details of these changes in What-is-new-in-PostgreSQL-9.0-RPMs.html.

I'll reiterate the key elements and consequences of these changes you need to watch out for.

Key Steps to setup

If you want the service to start up on reboot, then simply do this:

su root
service postgresql-9.3 initdb 
service postgresql-9.3 start
chkconfig --list #(to see list of services)
chkconfig postgresql-9.3 on #(to have start on bootup)

The data cluster is created by default in /var/lib/pgsql/9.3/data and the extensions folder is in /usr/pgsql-9.3/share/extension/ and the binaries are in /usr/pgsql-9.3/bin. To use psql, you can generally get away with just typing psql without the full path, but if you have multiple installations of PostgreSQL, you're better off being explicit which one you want.

To connect to your postgres server do this:

su postgres
/usr/pgsql-9.3/bin/psql -p 5432

To install the adminpack useful for viewing logs and editing postgresql.conf from the comfort of PgAdmin, don't forget to install the admin pack

su postgres
/usr/pgsql-9.3/bin/psql -p 5432 -c "CREATE EXTENSION adminpack;"

On startup do a:

service postgresql-9.3 status

You should see a pid runnig ... message if all is good. If it says stopped, then check your /var/lib/pgsql/9.3/data/pg_log last log file which usually lists what went wrong. Often times it's usually caused by a typo you introduced in pg_hba.conf or postgresql.conf .

su postgres
psql -p 5432 #or whatever port you chose
CREATE role regina LOGIN PASSWORD 'whateveryouwant' SUPERUSER;

At the psql prompt: type the query below to verify the location of your cluster:

SELECT setting FROM pg_settings WHERE name = 'config_file';
which should return an answer of where your configuration file is:
                 setting
-----------------------------------------
 /var/lib/pgsql/9.3/data/postgresql.conf
or The location of where you setup your cluster.

then do a \q to exit the psql console

Whenever you change the pg_hba.conf file, you need to do a restart or a:
service postgresql-9.3 reload
for the changes to take effect.

Creating a PostGIS/pgRouting enabled database

If you want to create a new database that is PostGIS enabled, do this:

su postgres
/usr/pgsql-9.3/bin/psql -p 5432

In psql command prompt type following:

CREATE ROLE gisdb_user LOGIN PASSWORD 'whatever'; CREATE DATABASE gisdb WITH OWNER gisdb_user; \connect gisdb; CREATE EXTENSION postgis; SELECT postgis_full_version(); --if you want a side of pgRouting with PostGIS -- add this -- CREATE EXTENSION pgrouting; SELECT * FROM pgr_version(); \q \exit

The output of the postgis_full_version() command should be something like:

POSTGIS="2.1.1 r12113" GEOS="3.4.2-CAPI-1.8.2 r3921" PROJ="Rel. 4.8.0, 6 March 2012" GDAL="GDAL 1.9.2, released 2012/10/08" LIBXML="2.7.6" LIBJSON="UNKNOWN" RASTER
if postgis is properly installed.

The output of SELECT * FROM pgr_version();; should be something like:

 version |       tag       | build |  hash   | branch | boost
---------+-----------------+-------+---------+--------+--------
 2.0.0   | pgrouting-2.0.0 | 0     | f26831f | master | 1.41.0
WARNING: If you are running RHEL 5, as Devrim noted here, raster support was not compiled in because of dependency issues, which also means you can't install with extensions. If you don't have PostGIS extension support. You need to install the scripts in share/contrib/postgis-2.1 (postgis.sql, spatial_ref_sys.sql, postgis_comments.sql).
Turning off firewall or enabling PostgreSQL access

If after all those changes, you still can't access your PostgreSQL server from pgAdmin external, verify if you have firewall running. The Image I grabbed had iptables on.

su root
service iptables status

Just for perspective, our rule table looked like this before. As you can see no rule to enable postgres access.

Table: filter
Chain INPUT (policy ACCEPT)
num  target     prot opt source               destination
1    ACCEPT     all  --  0.0.0.0/0            0.0.0.0/0           state RELATED,ESTABLISHED
2    ACCEPT     icmp --  0.0.0.0/0            0.0.0.0/0
3    ACCEPT     all  --  0.0.0.0/0            0.0.0.0/0
4    ACCEPT     tcp  --  0.0.0.0/0            0.0.0.0/0           state NEW tcp dpt:22
5    ACCEPT     tcp  --  0.0.0.0/0            0.0.0.0/0           state NEW tcp dpt:80
6    ACCEPT     tcp  --  0.0.0.0/0            0.0.0.0/0           state NEW tcp dpt:443
7    REJECT     all  --  0.0.0.0/0            0.0.0.0/0           reject-with icmp-host-prohibited

Chain FORWARD (policy ACCEPT)
num  target     prot opt source               destination
1    REJECT     all  --  0.0.0.0/0            0.0.0.0/0           reject-with icmp-host-prohibited

Chain OUTPUT (policy ACCEPT)
num  target     prot opt source               destination
service iptables stop

Verify you can connect after turning off. Okay now turn back on. The below example will enable tcp ports 5432-5438 (which we will use for postgres services) and insert the rule in the chain INPUT at row 7. Note my 10th rule is to reject all, so want all my access rules to be before that.


service iptables start
iptables -I INPUT 7 -p tcp --dport 5432:5438 -j ACCEPT
service iptables save
service iptables restart

After we were done, it looked like this:

Chain INPUT (policy ACCEPT)
num  target     prot opt source               destination
1    ACCEPT     all  --  0.0.0.0/0            0.0.0.0/0           state RELATED,ESTABLISHED
2    ACCEPT     icmp --  0.0.0.0/0            0.0.0.0/0
3    ACCEPT     all  --  0.0.0.0/0            0.0.0.0/0
4    ACCEPT     tcp  --  0.0.0.0/0            0.0.0.0/0           state NEW tcp dpt:22
5    ACCEPT     tcp  --  0.0.0.0/0            0.0.0.0/0           state NEW tcp dpt:80
6    ACCEPT     tcp  --  0.0.0.0/0            0.0.0.0/0           state NEW tcp dpt:443
7    ACCEPT     tcp  --  0.0.0.0/0            0.0.0.0/0           tcp dpts:5432:5438
8    REJECT     all  --  0.0.0.0/0            0.0.0.0/0           reject-with icmp-host-prohibited

Chain FORWARD (policy ACCEPT)
num  target     prot opt source               destination
1    REJECT     all  --  0.0.0.0/0            0.0.0.0/0           reject-with icmp-host-prohibited

Chain OUTPUT (policy ACCEPT)
num  target     prot opt source               destination